Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015881916.1_cds_XP_016437945.1_33659
CDS Infomation

[gene=LOC107763949] [db_xref=GeneID:107763949] [protein=zeaxanthin epoxidase, chloroplastic-like] [protein_id=XP_016437945.1] [location=join(88519..89021,89620..89782,89970..90044,90244..90344,90467..90582,91554..91765,92951..93042,93366..93480,93577..93680,94087..94132,94264..94328,94428..94514,94952..95006,95114..95202,95288..95375,95464..95547)] [gbkey=CDS]
Sequence

ATGTATTCAACTGTGTTTTACACTTCAGTTCATCCATCAACTTCAGCTTTTTCAAGAAAG
CAGCTGCCTTTCTTGATCTCTAAGGATTTCCCAACAGAGTTGTATCATTCTTTACCATGC
AGCAGAAGCTTGGAAAATGGTCAAATCAAGAAAGTCAAAGGAGTAGTAAAAGCCACAATA
GCTGAAGCTCCAGCTACTACTCCTACAACTGATTTGAAAAAGGTACCACAGAAGAAGTTG
AAAGTACTAGTAGCAGGTGGTGGGATTGGAGGGTTAGTGTTTGCATTGGCTGCAAAGAAA
AGGGGATTTGAGGTGTTGGTATTTGAGAGGGATTTAAGTGCTATTAGAGGAGAAGGGCAA
TATAGAGGACCAATTCAGATACAGAGCAATGCATTGGCTGCTTTGGAAGCAATTGATATG
GATGTTGCTGAAGACATAATGAATGCTGGCTGTATCACTGGTCAAAGGATTAATGGCTTG
GTTGATGGTGTTTCTGGTAACTGGTATTGCAAGTTTGATACTTTCACTCCAGCAGTGGAA
CGTGGACTTCCTGTGACAAGAGTAATCAGCCGCATGACTTTGCAGCAGATCCTTGCACGT
GCTGTTGGGGAGGATATAATTATGAATGAAAGTAATGTAGTTAACTTTGAGGATGATGGT
GAAAAGGTTACTGTGACTCTTGAAGATGGACAGCAATATTCAGGTGATCTTCTGGTTGGT
GCTGATGGCATAAGGTCTAAGGTACGGACTAATTTGTTTGGACCCAGTGATGTTACTTAC
TCTGGCTACACTTGTTACACTGGAATTGCAGATTTTATTCCTGCTGATATTGAGACAGTT
GGGTACCGAGTTTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGTGGAGGC
AAGATGCAGTGGTATGCATTTCACAATGAACCAGCTGGTGGCGTGGATGATCCAAACGGT
AAAAAGGCAAGATTGCTTAAAATATTTGAGGGATGGTGTGATAATGTTATAGACCTATTA
GTTGCCACAGATGAAGATGCAATTCTTCGACGTGACATCTATGATAGACCACCAACCTTT
AATTGGGGAAAAGGTCGTGTTACATTGCTTGGGGACTCTGTCCATGCTATGCAGCCTAAT
TTGGGTCAAGGGGGATGCATGGCCATAGAGGATAGCTATCAACTAGCACTGGAACTTGAT
AAAGCATTGAGCCGAAGTGCCGAGTCAGGAAGCGCAGTGGATATCATCTCATCTTTAAGG
AGCTATGAAAGTTCTAGAAAACTTCGAGTTGGAGTTATCCATGGACTGGCTAGAATGGCT
GCAATCATGGCATCAACTTACAAGGCTTATCTTGGTGTCGGACTTGGTCCATTATCATTT
TTGACCAAGTTTCGGATACCACATCCTGGAAGAGTTGGTGGAAGATTTTTTATTGACTTG
GGAATGCCGCTTATGTTAAGCTGGGTTCTAGGAGGCAACGGTGAAAAGCTTGAAGGCAGA
ATAAAACATTGCAGGCTATCTGAGAAAGCAAATGACCAATTGAGGAATTGGTTTGTAGAT
GATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGGTTACTGCTTCCTGCCGGGAATGGC
AATGCTGCTGTAGAAGCTCTTGTTTTAAGCAGAGATGAGGATATGCCTTGCACTATTGGG
TCTGTCTCACATACAAACATTCCTGGAAAATCACTAGTTATACCTTTGCCTCAGGTGTCC
GAAATGCACGCCCGGATATCCTACAAAGGTGGAGCTTTTTTTGTAACTGATTTACGAAGT
GAACATGGTACCTGGATTACGGATAATGAAGGCAGAAGATACCGAGCGTCTCCAAACTTT
CCTACTCGTTTTCATCCATCAGATATTATTGAATTTGGTTCTGATAAGAAGGCAGCATTT
CGTGTAAAGGTAATGAAATTTCCTTCAAAAACTGCTGCAAAGAAGGAAGAGCGTCAAGCA
GTGGGGGCAGCTTGA

Peptide Sequence

PEP ID

XP_016437945.1
PEP Infomation

PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Nicotiana tabacum]
Sequence

MYSTVFYTSVHPSTSAFSRKQLPFLISKDFPTELYHSLPCSRSLENGQIKKVKGVVKATI
AEAPATTPTTDLKKVPQKKLKVLVAGGGIGGLVFALAAKKRGFEVLVFERDLSAIRGEGQ
YRGPIQIQSNALAALEAIDMDVAEDIMNAGCITGQRINGLVDGVSGNWYCKFDTFTPAVE
RGLPVTRVISRMTLQQILARAVGEDIIMNESNVVNFEDDGEKVTVTLEDGQQYSGDLLVG
ADGIRSKVRTNLFGPSDVTYSGYTCYTGIADFIPADIETVGYRVFLGHKQYFVSSDVGGG
KMQWYAFHNEPAGGVDDPNGKKARLLKIFEGWCDNVIDLLVATDEDAILRRDIYDRPPTF
NWGKGRVTLLGDSVHAMQPNLGQGGCMAIEDSYQLALELDKALSRSAESGSAVDIISSLR
SYESSRKLRVGVIHGLARMAAIMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDL
GMPLMLSWVLGGNGEKLEGRIKHCRLSEKANDQLRNWFVDDDALERATDAEWLLLPAGNG
NAAVEALVLSRDEDMPCTIGSVSHTNIPGKSLVIPLPQVSEMHARISYKGGAFFVTDLRS
EHGTWITDNEGRRYRASPNFPTRFHPSDIIEFGSDKKAAFRVKVMKFPSKTAAKKEERQA
VGAA

Transcript Sequence

Gene sequence data has not been registered.